tag:blogger.com,1999:blog-7497105671108206262.post3750792678346236055..comments2023-10-28T07:51:34.506-07:00Comments on MolBio Research Highlights: What do you use for your DNA and protein sequence analysis ?Alejandro Montenegro-Monterohttp://www.blogger.com/profile/18078462764857337905noreply@blogger.comBlogger2125tag:blogger.com,1999:blog-7497105671108206262.post-81133821265642156072009-12-19T04:52:40.802-08:002009-12-19T04:52:40.802-08:00I agree, but I guess I only wanted to know what pe...I agree, but I guess I only wanted to know what people <i>mainly</i> use for their sequence analysis. <br /><br />We could generate a new poll asking for items independently, like "what do you use for sequence alignment", "what do you use for primer design", etc.<br />That poll could give a lot of info but I don't know that many different softwares, so input from the Alejandro Montenegro-Monterohttps://www.blogger.com/profile/18078462764857337905noreply@blogger.comtag:blogger.com,1999:blog-7497105671108206262.post-14685109572357134432009-12-18T21:08:52.016-08:002009-12-18T21:08:52.016-08:00Difficult to answer this poll, since I use differe...Difficult to answer this poll, since I use different pieces of software for different tasks. For viewing and editing protein and DNA sequence alignments, I use Jalview. For dealing with DNA sequencing trace files & manually correcting base calls, have used Chromas or FinchTV in the past, and more recently UGENE. Designing primers for cloning, I generally use a text editor (eg, vim or gVim) ..Anonymousnoreply@blogger.com